Technical Documentation

DNAI Whitepapers

Deep-dive technical documentation on the architecture, algorithms, and validated performance of the Physics-Constrained Digital Twin platform.

Technical Overview
v5.10

Foundation White Paper

Neuro-Symbolic architecture overview. H-BDVAE perception engine, dual-path system, and physics-constrained simulation.

Hybrid Engine Architecture
H-BDVAE v5.10 + DSN Pipeline
Path A (0.704) + Path B (0.687)
Jan 20267 sections
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Recommended
Scientific
The Twist

The Dark Matter of Oncology

Why genomics alone cannot predict resistance. Non-Mutational Resistance and the failure of standard AI.

The "Genomic Ceiling"
Latent Collapse Explained
Epigenetic Signal Recovery
Jan 20267 sections
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New
Regulatory
Clinical

Sim-to-Real Architecture

Split-Source Transfer Learning for predictive oncology. From organoids to patients via domain separation.

Stroma Replacement Problem
Domain Separation Networks
Bayesian Borrowing Strategy
Jan 20265 sections
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Patent
Legal
IP

Patent Application

Physics-Constrained Sim-to-Real Transfer Learning in Computational Oncology.

Domain Separation Network
Neural ODE Architecture
20 Claims
Jan 20267 sections
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Patent
Legal
IP

Patent 2: Representational Collapse Prevention

Preventing metabolic scaling-induced representational collapse in cross-species oncology models.

Selective Adversarial Alignment
Variance Collapse Prevention
23 Claims
Feb 20267 sections
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Patent
Legal
IP

Patent 3: Uncertainty & Missing Modalities

Uncertainty-calibrated missing modality handling, separated-state dynamics, and multi-layer UQ.

PESD Self-Distillation
Three-Layer Uncertainty
33 Claims
Feb 20267 sections
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Patent
Legal
IP

Patent 4: Ontology-Guided Autogradient

Preventing training collapse in domain adaptation via ontology-guided autogradient modulation.

Pathway-Aware GRL
Stability Monitoring
20 Claims
Feb 202663/988,460
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Patent
Legal
IP

Patent 5: Adjoint Sensitivity Control

Control of adjoint sensitivity computation graphs and physics-constrained gradient topologies.

ExecutionToken + Ed25519
Solver Interlock
20 Claims
Feb 202663/988,475
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Patent
Legal
IP

Patent 6: Distributionally Robust Training

DRO training of physics-constrained cancer digital twins using dual-mode risk set construction.

Dual-Mode Risk Sets
Worst-Case Optimization
20 Claims
Feb 202663/988,480
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Patent
Legal
IP

Patent 7: Risk-Averse Stochastic Optimization

Stabilized stochastic inference and risk-averse optimization in physics-constrained oncology digital twins.

MC Dropout + BN Freeze
CVaR-Borda Ranking
20 Claims
Feb 202663/991,254
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Patent
Legal
IP

Patent 8: Runtime Resource Gating

Cryptographically enforced runtime resource gating in ODE solvers via memory allocation interlock.

ExecutionToken + Ed25519
Solver Interlock
20 Claims
Feb 202663/991,263
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Hybrid Engine Performance

Validated on TCGA Pan-Cancer (33 cancer types) + PDX Models

0.704
Path A C-index
Human (Specialist)
0.687
Path B C-index
PDX (Translator)
0.74
Uncertainty-Gated C-index
Green tier (CPTAC)
0.91
PDX Trajectory R²
Growth curves
<0.001
Orthogonality
Bio/Growth R²

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